Genetics: Analysis and Principles
6th Edition
ISBN: 9781259616020
Author: Robert J. Brooker Professor Dr.
Publisher: McGraw-Hill Education
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Textbook Question
Chapter 29, Problem 12EQ
Discuss how the principle of parsimony can be used in a cladistics approach to constructing a phylogenetic tree.
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Briefly describe differences among the distance approach, the maximum parsimony approach, and the maximum likelihood approach to the reconstruction of phylogenetic trees.
Explain the difference between maximum Parsimony and maximum likelihood, when used in computing phylogenetic trees.
List the differences between distance-based and character-based methods for constructing a phylogenetic tree. Which type is maximum parsimony? Explain your answer.
Chapter 29 Solutions
Genetics: Analysis and Principles
Ch. 29.1 - Prob. 1COMQCh. 29.1 - Prob. 2COMQCh. 29.1 - 3. A pair of birds flies to a deserted island and...Ch. 29.1 - Prob. 4COMQCh. 29.2 - 1. Phylogenetic trees are based on
a. natural...Ch. 29.2 - Prob. 2COMQCh. 29.2 - An approach that is used to construct a...Ch. 29.2 - 4. Horizontal gene transfer is a process in which...Ch. 29.3 - Prob. 1COMQCh. 29.3 - Prob. 2COMQ
Ch. 29.3 - When the chromosomes of closely related species...Ch. 29 - 1. Discuss the two principles on which evolution...Ch. 29 - 2. Evolution, which involves genetic changes in a...Ch. 29 - Prob. 3CONQCh. 29 - Prob. 4CONQCh. 29 - 5. Would each of the following examples of...Ch. 29 - Distinguish between anagenesis and cladogenesis....Ch. 29 - 7. Describe three or more genetic mechanisms that...Ch. 29 - Explain the type of speciation (allopatric,...Ch. 29 - Prob. 9CONQCh. 29 - Prob. 10CONQCh. 29 - Discuss the major differences among allopatric,...Ch. 29 - Prob. 12CONQCh. 29 - Prob. 13CONQCh. 29 - Would the rate of deleterious or beneficial...Ch. 29 - 15. Which would you expect to exhibit a faster...Ch. 29 - Prob. 16CONQCh. 29 - 17. Plant seeds contain storage proteins that are...Ch. 29 - Take a look at the -globin and -globin amino acid...Ch. 29 - Compare and contrast the neutral theory of...Ch. 29 - Prob. 20CONQCh. 29 - 21. As discussed in Chapter 27, genetic variation...Ch. 29 - Prob. 22CONQCh. 29 - Two populations of snakes are separated by a...Ch. 29 - 2. Sympatric speciation by allotetraploidy has...Ch. 29 - 3. Two diploid species of closely related frogs,...Ch. 29 - A researcher sequenced a portion of a bacterial...Ch. 29 - F1hybrids between two species of cotton,Gossypium...Ch. 29 - 6. A species of antelope has 20 chromosomes per...Ch. 29 - Prob. 7EQCh. 29 - 8. Prehistoric specimens often contain minute...Ch. 29 - From the results of the experiment of Figure...Ch. 29 - InChapter 23, a technique called fluorescence in...Ch. 29 - Prob. 11EQCh. 29 - 12. Discuss how the principle of parsimony can be...Ch. 29 - 13. A homologous DNA region, which was 20,000 bp...Ch. 29 - Prob. 14EQCh. 29 - Prob. 1QSDCCh. 29 - 2. Compare the forms of speciation that are slow...Ch. 29 - 3. Do you think that Darwin would object to the...
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- Define homology and homoplasy and explain their connection to the concept of parsimony in phylogenetic analysis. Provide an example of each and discuss the challenges they may present when inferring evolutionary relationships.arrow_forwardOutline the general considerations used in building a phylogenetic treearrow_forwardDescribe the two methods that are used to identify similarity between species when creating phylogenetic trees.arrow_forward
- Explain the steps for Constructing a species-level phylogenetic tree usingDNA sequences ?arrow_forwardWithin the field of phylogenetics, what does a “bootstrap value” represent? (write/make 3 points for this question)arrow_forwardDiscuss the problems in developing an accurate phylogenetic tree. Do you think it is possible to create a completely accurate universal phylogenetic tree? Explain your answer.arrow_forward
- Describe at least one reason that the traditional phylogenetic tree model may require modification.arrow_forwardCan you construct a phylogenetic tree for the following?arrow_forwardWhich of the following best explains why coalescent-based phylogenetic inference is important in the age of phylogenomics? A) Coalescent-based methods directly model gene tree histories independently to infer the species tree in a summary-based manner, which is important for phylogenomic analysis were hundreds to thousands of gene histories are analyzed. B) Coalescent-based methods have the most advanced evolutionary models of molecular evolution, which is important for phylogenomic analysis were hundreds to thousands of gene histories are analyzed. C) Coalescent-based methods are no more important than other types of phylogenetic inference, even for phylogenomic analyses. D) None of the above.arrow_forward
- Construct a cladogram that provides one hypothesis about the evolutionary history for these 6 taxa. Be sure to map each of the character states for every taxon represented in the character matrix. See tips below to help get you started. You can insert a photo of a hand drawn cladogram or create one on your device. Keep in mind that cladograms are hypotheses, there are many different cladograms that can be constructed. a) Which characteristics were identified as homoplasies on your cladogram? b)arrow_forwardConstruct a cladogram that provides one hypothesis about the evolutionary history for these 6 taxa. Be sure to map each of the character states for every taxon represented in the character matrix. See tips below to help get you started. You can insert a photo of a hand drawn cladogram or create one on your device. Keep in mind that cladograms are hypotheses, there are many different cladograms that can be constructed. a) Which characteristics were identified as homoplasies on your cladogram? b) Now that your tree has been constructed, how confident do you feel in your hypothesis and why?arrow_forwardWhat is the purpose of using an “outgroup” when reconstructing a phylogenetic tree? (Write 4 points)arrow_forward
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