Genetics: From Genes to Genomes
Genetics: From Genes to Genomes
6th Edition
ISBN: 9781259700903
Author: Leland Hartwell Dr., Michael L. Goldberg Professor Dr., Janice Fischer, Leroy Hood Dr.
Publisher: McGraw-Hill Education
bartleby

Concept explainers

bartleby

Videos

Textbook Question
Book Icon
Chapter 6, Problem 15P

The CAP protein is shown bound to DNA in Fig. 6.15. CAP binds a specific sequence of base pairs in DNA (N = any base):

5′ TGTGANNNNNNTCACA 3′

3′ ACACTNNNNNNAGTGT 5′

a. In a long double-stranded DNA molecule with random base sequence and an equal number of A–T and G–C base pairs, how many different kinds of DNA sequences could be bound by CAP?
b. In the same DNA molecule, how frequently would a CAP binding site of any type be present? Of a particular type?
c. CAP protein binds DNA as dimer; two identical CAP protein subunits bound to each other bind DNA. Can you detect a special feature of the DNA site that CAP binds that suggests that two identical protein subunits bind the DNA? (Hint: Try reading the sequence in the 5′-to-3′ direction on each strand.)
d. CAP protein binds to the major groove of DNA. Do you expect that DNA helicase is required for CAP to bind DNA?
Blurred answer
Students have asked these similar questions
Here is a DNA coding strand’s sequence and direction: 5’-ATGCCGATATAG-3’ . What would be the amino acid sequence in the polypeptide encoded by this DNA?
a) It is known    that    double    stranded    DNA    is    denatured    at    low    pH.     pKa values    should    allow    the    determination    of    whether    this    is    due    to    perturbation    of    the    hydrogen    bonding    in    A-T    and/or    G-C    base    pairs.    The    table    gives    values    for    the    pKas    of different    protonated    groups    in    the    nucleobases.Nucleobase Position    &    pKa                    A             N1,            3.5                    G             N7,            1.6;                N1,    9.2                    C             N3,        4.2                    T             N3,        9.7a)   Draw    the    A-T    and    G-C    base    pairs.                - Label    the    bases    with    the    one-letter    code.    –        - Number    the    atoms    in    the    rings and    label    the    atom    that    attaches    to    the    sugar.                - Mark the groups that interact in normal…
Below are shown two views of the backbone representation of the Myc-Max complex binding to DNA (PDB ID: 1NPK). Myc and Max are members of the basic helix-loop-helix (BHLH) class of DNA- binding proteins (see Chapter 29). Myc (red) and Max (blue) associ- ate via a coiled-coil interaction and bind DNA as a dimer. Side view of Myc-Max bound to DNA Top view of Myc-Max bound to DNA (looking down the DNA helical axis) (a) Are the helices bound to the DNA likely to be amphiphilic? Explain. (b) Where do you predict the N- and C-termini are located for Max?

Chapter 6 Solutions

Genetics: From Genes to Genomes

Ch. 6 - A particular virus with DNA as its genetic...Ch. 6 - The underlying structure of DNA is very simple,...Ch. 6 - Prob. 13PCh. 6 - Bacterial transformation and bacteriophage...Ch. 6 - The CAP protein is shown bound to DNA in Fig....Ch. 6 - In Meselson and Stahls density shift experiments...Ch. 6 - When Meselson and Stahl grew E. coli in 15N medium...Ch. 6 - If you expose human tissue culture cells for...Ch. 6 - Draw a replication bubble with both replication...Ch. 6 - a. Do any strands of nucleic acid exist in nature...Ch. 6 - As Fig. 6.21 shows, DNA polymerase cleaves the...Ch. 6 - The bases of one of the strands of DNA in a region...Ch. 6 - Replicating structures in DNA can be observed in...Ch. 6 - Indicate the role of each of the following in DNA...Ch. 6 - Draw a diagram of replication that is occurring at...Ch. 6 - Figure 6.18 depicts Watson and Cricks initial...Ch. 6 - Researchers have discovered that during...Ch. 6 - A DNA synthesizer is a machine that uses automated...Ch. 6 - Bacterial cells were coinfected with two types of...Ch. 6 - A yeast strain with a mutant spo11- allele has...Ch. 6 - Imagine that you have done a cross between two...Ch. 6 - The Neurospora octad shown came from a cross...Ch. 6 - From a cross between e f g and e f g strains of...Ch. 6 - In Step 6 of Fig. 6.27, the resolvase enzyme...Ch. 6 - Figure 6.31shows four potential outcomes of...Ch. 6 - Each of the substrates for site-specific...Ch. 6 - Prob. 37PCh. 6 - Suppose that you could inject a wild-type mouse...Ch. 6 - C31 is a type of bacteriophage that infects...Ch. 6 - Cre is a recombinase enzyme encoded by a gene in...Ch. 6 - Like Cre/loxP recombination, site-specific...
Knowledge Booster
Background pattern image
Biology
Learn more about
Need a deep-dive on the concept behind this application? Look no further. Learn more about this topic, biology and related others by exploring similar questions and additional content below.
Similar questions
SEE MORE QUESTIONS
Recommended textbooks for you
Text book image
Biology: The Dynamic Science (MindTap Course List)
Biology
ISBN:9781305389892
Author:Peter J. Russell, Paul E. Hertz, Beverly McMillan
Publisher:Cengage Learning
Genome Annotation, Sequence Conventions and Reading Frames; Author: Loren Launen;https://www.youtube.com/watch?v=MWvYgGyqVys;License: Standard Youtube License