A researcher is interested in using the in vitro technique of bisulfite conversion to confirm the methylation status of a DNA sequence. A. In vitro Sodium bisulfite treatment of DNA results in what type of chemical reaction? i. Which bases are preferentially affected? B. What nucleotide change is expected immediately following sodium bisulfite treatment of the DNA? C. You analyze the following DNA sequence before bisulfite treatment and after bisulfite treatment followed by a 30-cycle PCR reaction. Based on sequence comparison, how many cytosines were unmethylated in the original DNA sequence? Briefly explain how you came to this conclusion. Before bisulfite treatment: After bisulfite treatment and a 30-cycle PCR reaction: 5' CGACGCGCGATTCATTCGATT 3' 5' TGACGCGTGATTTATTTGATT 3'

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A researcher is interested in using the in vitro technique of bisulfite conversion to confirm the
methylation status of a DNA sequence.
A. In vitro Sodium bisulfite treatment of DNA results in what type of chemical reaction?
i. Which bases are preferentially affected?
B. What nucleotide change is expected immediately following sodium bisulfite treatment
of the DNA?
C. You analyze the following DNA sequence before bisulfite treatment and after bisulfite
treatment followed by a 30-cycle PCR reaction. Based on sequence comparison, how
many cytosines were unmethylated in the original DNA sequence? Briefly explain how
you came to this conclusion.
Before bisulfite treatment:
After bisulfite treatment and a 30-cycle PCR reaction:
5' CGACGCGCGATTCATTCGATT 3'
5' TGACGCGTGATTTATTTGATT 3'
Transcribed Image Text:A researcher is interested in using the in vitro technique of bisulfite conversion to confirm the methylation status of a DNA sequence. A. In vitro Sodium bisulfite treatment of DNA results in what type of chemical reaction? i. Which bases are preferentially affected? B. What nucleotide change is expected immediately following sodium bisulfite treatment of the DNA? C. You analyze the following DNA sequence before bisulfite treatment and after bisulfite treatment followed by a 30-cycle PCR reaction. Based on sequence comparison, how many cytosines were unmethylated in the original DNA sequence? Briefly explain how you came to this conclusion. Before bisulfite treatment: After bisulfite treatment and a 30-cycle PCR reaction: 5' CGACGCGCGATTCATTCGATT 3' 5' TGACGCGTGATTTATTTGATT 3'
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