Life: The Science of Biology
Life: The Science of Biology
11th Edition
ISBN: 9781319010164
Author: David E. Sadava, David M. Hillis, H. Craig Heller, Sally D. Hacker
Publisher: W. H. Freeman
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Chapter 18.2, Problem 2R
Summary Introduction

To review:

The sequential steps for inserting a foreign DNA (deoxyribonucleic acid) into a plasmid or vector by arranging the below-mentioned steps in a correct order:

a. Transform host cells.

b. Select colonies for antibiotic resistance.

c. Select colonies that do not grow under ultraviolet light.

d. Digest vector and foreign DNA with a restriction enzyme.

e. Ligate the digested plasmid together with the foreign DNA.

Introduction:

Plasmids are small, extra-chromosomal DNA molecules. They are usually circular and are relatively smaller (2000–6000 base pairs). There are often multiple restriction sites present in a plasmid sequence. Thus, this makes it easier for the insertion of a new foreign DNA. In the given case, it is assumed that a plasmid vector contains genes for green fluorescent protein (GFP) as well as for ampicillin resistance. A restriction site is present on the gene for GFP only. A foreign DNA needs to be inserted into this plasmid, which in turn, is to be inserted into the bacteria.

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You are studying a new plasmid, and you digest the plasmid with three restriction enzymes: Eco RI (E), Hindlll (H), and Xbal (X). You digest the plasmid DNA with each of the following combinations of enzymes and observe the results on an agarose gel. You are provided a partial plasmid map as shown below to the right. +18 a. What is the size of this plasmid in base pairs? b. What is the distance in base pairs between E1 and H? c. What is the distance in base pairs between E1 and X? d. What is the distance in base pairs between E2 and H? e. What is the distance in base pairs between E2 and X?
You are studying a new plasmid, and you digest the plasmid with three restriction enzymes: Eco RI (E), HindlII (H), and Xbal (X). You digest the plasmid DNA with each of the following combinations of enzymes and observe the results on an agarose gel. You are provided a partial plasmid map as shown below to the right. E H E+H E+X H+X Kb +4.3 +2.8 +2.5 - +2.0 -- -1.8 -1.5 12 +1.0 +0.8 +0.5 - a. What is the size of this plasmid in base pairs? b. What is the distance in base pairs between E1 and H? c. What is the distance in base pairs between E1 and X? d. What is the distance in base pairs between E2 and H? e. What is the distance in base pairs between E2 and X?
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