What is the program Finch TV used for? Viewing next generation sequencing data Opening sequencing files with the .bam file extension Opening sanger sequencing files with the .ab1 file extension Opening NGS files with the .ab1 file extension

What is the program Finch TV used for? Viewing next generation sequencing data Opening sequencing files with the .bam file extension Opening sanger sequencing files with the .ab1 file extension Opening NGS files with the .ab1 file extension

Biology 2e

2nd Edition

ISBN:9781947172517

Author:Matthew Douglas, Jung Choi, Mary Ann Clark

Publisher:Matthew Douglas, Jung Choi, Mary Ann Clark

Chapter17: Biotechnology And Genomics

Section: Chapter Questions

Problem 9RQ: generated after a cDNA library is made unique sequences in the genome useful for mapping using...

See similar textbooks

Related questions

Q: A restriction enzyme with a 6 base pair recognition site will cut the human genome roughly a. 70…

A: A gene is the most fundamental unit of hereditary. A gene is made up of multiple nucleotide…

Q: Why is genome database and annotation relevant to Genome sequencing? Are there any examples?

A: Genome: the set of genes. Genome database: it is the collection of all information on the human…

Q: Write an accurate and precise differential report on the sanger sequencing technique

A: The sanger sequencing technique is also called chain-termination method which is made to determined…

Q: What are the things to consider in making a good primer? Does temperature affects the primer design?…

A: A primer is just a tiny sequence of nucleic acids that serve as the origin for DNA synthesis.

Q: The human genome is made from more than 3 billion nucleotides. How many sites (loci) are…

A: According to the question, The human genome is made from more than 3 billion nucleotides. How many…

Q: Next-Generation sequencing Write a precise and accurate differential report on the above sequencing…

A: NGS is an advanced DNA sequencing technique used high throughput and massively parallel sequencing…

Q: Write a precise and accurate differential report on Sanger sequencing and next generation sequencing…

A: The process of DNA sequencing is the determination of the order of nucleotides present in the DNA…

Q: You grow this weird looking organism in lab and have no idea what it is. You decide to sequence its…

A: As organisms evolve, their DNA and protein sequences change. According to the molecular clock…

Q: Draw a figure describing the steps in MANUAL Sangers sequencing not automatic sangers sequencing.…

A: Sanger sequencing results in the formation of extension products of various lengths terminated with…

Q: Suppose that you would like to amplify the DNA sequence below by a PCR reaction. Design 8 nucleotide…

A: Primer is a shory stretch of nucleotides which binds to 3' end of template DNA. It provides free OH…

Q: The drug Celebrex selectively inhibits PTGS2 while aspirin and other NSAID’s inhibit both PTGS1 and…

A: Prostaglandin- endoperoxide synthase (PTGS) is also called as cyclooxygenase which helps in…

Q: Consider the diagram below. What Boolean phrase would you use to look for articles related to the…

A: Boolean Operators are simple words (AND, OR, NOT or AND NOT) used as conjunctions to combine or…

Q: The enzymes mentioned below are used as tools during cloning, DNA sequencing and/or gene therapy.…

A: Enzymes Enzymes are the protein that use as catalysts in metabolic and catabolic reaction to fasten…

Q: Answer the following scenarios like you are the experts in the field of genetic engineering. Write…

A: DNA sequencing is the process of determining the order of nucleotide bases or nucleic acid…

Q: What is Sanger sequencing used for?

A: DNA sequencing is defined as a process in which DNA’s nucleotide sequence is determined. The main…

Q: Draw an annotated diagram outlining the steps involved in a Next Generation sequencing technology of…

A: Next-generation sequencing is very effective and beneficial and the data represented are short and…

Q: Sanger sequencing Write a precise and accurate differential report on the above sequencing…

A: DNA sequencing is the process of determining the sequence of nucleotides (As, Ts, Cs, and Gs) in a…

Q: What are three benefits Ion torrent sequencing has over sanger sequencing

A: DNA is an important biomolecule in the cell as it is the genetic material for most of the organisms…

Q: What enzymes and structural proteins are not needed in the PCR reaction tube that are needed in…

A: Polymerase chain reaction (PCR) is a technique commonly used for copying the specific DNA…

Q: Imagine that you correctly prepare your PCR reaction mixture, but there is something wrong with the…

A: The polymerase chain reaction is the PCR in which the genes are amplified i.e make millions to…

Q: If you didn't know the sequence of the segment of DNA you want to amplify, how would you perform the…

A: Polymerase chain reaction is defined as the type of laboratory technique where it is used to amplify…

Q: What are the possible benefits and dangers of predicting how long a person will live from analyzing…

A: A genome sequence is the study of the genetic makeup of an individual and a whole-genome sequence is…

Q: Which best desrcibes a 'CRISPR'? a delivery vector a small DNA binding protein a…

A: The correct option is - clusters of short palindromic DNA .

Q: Which of the following is TRUE of next generation sequencing technology? It is required for CHIP-seq…

A: Next generation sequencing (NGS) is a massively used sequencing technology that has revolutionized…

Q: What would be your experimental strategy and the lab materials required to clone the complementary…

A: Aim - To clone the complementary human gene using a mammalian gene in conjunction with PCR so, first…

Q: Write an accurate and precise differential report on the next generation sequencing technique

A: The biological sciences have been transformed by next-generation sequencing (NGS). NGS helps…

Q: What are the two methods used for sequencing in Human genome project.

A: Answer- Human genome project was the mega project that aimed for sequencing of whole human genome.

Q: What are the steps in shotgun sequencing?

A: Shotgun sequencing is a laboratory method which is used to determine the sequence of DNA of an…

Q: Please answer asap and in short and content should not be palgarised please This field is a…

A: ANSWER;- D) biotechnology Explain;- Biotechnology is the utilization of science to take care of…

Q: What are the different types of PCR and their application? Please answer at your own words

A: PCR : Polymerase chain reaction - It is an efficient and cost effective molecular tool to copy or…

Q: The following DNA sequences were used to generate a contig from a genome sequencing project.…

A: Sequencing It is a method through which the complete genetic makeup of the organism is identified.…

Q: write a short note on different available methods for DNA SEQUENCING? proper explanation and diagram

A: The process of determining the order of nucleotides (basically, the order of four nitrogenous bases-…

Q: What

A: INTRODUCTION:- Shotgun sequencing involves randomly breaking up DNA sequences into lots of small…

Q: what ways have we in the past, or currently are, genetically engineering organisms? Give a specific…

A: Genetically modified organisms (GMOs) can be defined as organisms (i.e. plants, animals or…

Q: write a precise and accurate differential report on sanger sequencing and next generation sequencing…

A: The technologies of next-generation sequencing (NGS) are similar to sanger sequencing, but the…

Q: What molecule is next generation sequencing analyzing? DNA, RNA, or protein

A: What is next generation sequencing? It is the process of massive parallel sequencing of DNA…

Q: A. What are some reasons a person might want to clone a human? B. What animal was cloned in 1885

A: A )Some reasons a person might want to clone a human are : Because Human Cloning replicates a…

Q: What is the difference between a map-based approach to sequencing a whole genome and a whole-genome…

A: Deoxyribonucleic acid (DNA) is a double stranded helical genetic material containing thousands of…

Q: Draw an annotated diagram outlining the steps involved in a Next Generation sequencing technology of…

A: DNA is the genetic material of almost all living organisms. It consists of a ribose sugar, a…

Q: Find a genetically modified organism of interest. What organism is the origin of the coding…

A: GMO stands for the genetically modified organism, a type of life form whose genome has been altered…

Q: What does it mean if the closest matched organism that is returned from a BLAST search is less than…

A: Basic Local Alignment Search Tool (BLAST) is a bioinformatics tool. This is a method of comparing…

Q: Starting with an AA, 2n = 14 genome of Triticum urartu (wild einkorn wheat) and a BB, 2n = 14…

A: Cultivated wheats refer mainly to two types: the hexaploid bread wheat (Triticum aestivum)…

Q: Traditional Sanger sequencing has largely been replaced in recent years by next-generation and…

A: BASIC INFORMATION Gene Sequencing It is a process through which the arrangement of of the…

Q: What is the program Finch TV used for? Viewing next generation sequencing data O Opening sequencing…

A: There are so many computer application programs used in bioinformatics to read and interpret the…

Q: Where do you expect to see multiple “Ns” within a sequencing read? a)Within the first 25…

A: Nucleotide sequences have their role in every aspect of genetic machinery. This includes…

Q: You would like to amplify the gene shown below using PCR. What is the sequence of the primer you…

A: Option d

Q: What is the program Finch TV used for? O Viewing next generation sequencing data O Opening…

A: We are answering the first question For second question pl repost Sanger sequencing is the mechanism…

Q: Southern blotting is a method used in molecular biology for detection of a specific DNA sequence in…

A: Nucleic acid blotting is a well-established technique for locating a gene or sequence of interest…

Q: Given the electrophoresis profile of a Sanger sequencing result, what was the sequence of the…

A: The Sanger sequencing method is also called as chain termination method. In this method, dideoxy…

Question

What is the program Finch TV used for?

Viewing next generation sequencing data

Opening sequencing files with the .bam file extension

Opening sanger sequencing files with the .ab1 file extension

Opening NGS files with the .ab1 file extension

Expert Solution

This question has been solved!

Explore an expertly crafted, step-by-step solution for a thorough understanding of key concepts.

SEE SOLUTION Check out a sample Q&A here

Step 1

VIEW

Step 2

VIEW

Step by step

Solved in 2 steps

SEE SOLUTION Check out a sample Q&A here

Knowledge Booster

Learn more about

Need a deep-dive on the concept behind this application? Look no further. Learn more about this topic, biology and related others by exploring similar questions and additional content below.

Similar questions

What exactly is the purpose of the programme Finch TV? Examining the results of sequencing of the next generation It is necessary to use the.bam file extension in order to access sequencing files. For sanger sequencing files, the.ab1 file extension is required in order to open them. It is possible to open NGS files by using the.ab1 file extension.
What are three benefits Ion torrent sequencing has over sanger sequencing
Can you please check my answer and make sure it is correct. Question: Describe the two roles primers play in PCR. Answer: Primers are short sequences of single stranded DNA that mark both the ends of the target sequence to be amplified during PCR. One primer attaches to the top strand at one end (forward primer) and the other one attaches to the bottom strand at the other end of the segment (reverse primer). They are made specifically to attach to these sections of DNA because the nucleotides of the primers are complementary to the target sequence. Other than marking the starting and end points for PCR, primers are also necessary for the process because without them, DNA polymerase wouldn’t be able to synthesize the complementary strand of DNA because it can only add nucleotides to an existing piece.
Align two sequences: horizontal – GGAATGG, vertical – ATG, m=1, mm = 0, g=-1. Use the table below for the NW matrix. Write down and score all optimal global alignments. Complete the NW matrix below and show the alignment paths. Use the arrows and circles for the matrix and paths. Click the shapes and move them using your keyboard arrow keys (or drag). Click the shapes and then right-click to copy/paste or click and use Ctrl + C to copy, then Ctrl + V to paste (in Windows MS Word). 0000 Align and score 4 optimal alignments here. the first line, v sequence in the second line and Each alignment should have h sequence individual scores for each alignment position in the third line.
This BLAST program performs the greatest number of searches for the same query sequence and database because of the greatest number of the reading frame translations. TBLASTX BLASTX BLASTN BLASTP PSI BLAST
Draw an annotated diagram outlining the steps involved in a Next Generation sequencing technology of your choice (NOT capillary electrophoresis) and upload. Provide citations and references as needed.
Place the steps necessary to perform RNA-Seq in the correct order. Drag the text blocks below into their correct order. Reset MAAAAAAAAAKK MAAAAAAAAAAM Compare sequences to known genome sequence. Create cDNA using reverse transcription with primers complementary to linkers. Attach linkers to the ends of the RNAs. Perform next-generation DNA sequencing. Isolate RNA from cells or tissues of interest. Fragment the RNAs.
DNA Profiles as Tools for Identification STRs are: a. used for DNA profiles b. repeated sequences present in the human genome c. highly variable in copy number d. all of these e. none of these
generated after a cDNA library is made unique sequences in the genome useful for mapping using sequence information all of the above
Which of the following best describes the process of DNA sequencing? a. DNA is separated on a gel, and the different bands are labeled with fluorescent nucleotides and scanned with a laser. b. A laser is used to fluorescently label the nucleotides present within the DNA, the DNA is run on a gel, and then the DNA is broken into fragments. c. Nucleotides are scanned with a laser and incorporated into the DNA that has been separated on a gel, and then the DNA is amplified with PCR. d. Fragments of DNA are produced in a reaction that labels them with any of four different fluorescent dyes, and the fragments then are run on a gel and scanned with a laser. e. DNA is broken down into its constituent nucleotides, and the nucleotides are then run on a gel and purified with a laser.
Align two sequences: horizontal – GGAATGG, vertical – ATG, m= 2, mm = 0, g/o = -2, g/e = -1. Complete the NW matrix below and show the alignment paths. Write down and score all optimal alignments. Part 2. Dynamic Programming Assignment, Needleman-Wunsch Algorithm, Affine Gap Cost Click the shapes and move them using arrow keys (or drag). Click the shapes and right-click to copy/paste or click and use Ctrl + C to copy, then Ctrl + V to paste (in MS Word). 0000 Align and score all optimal alignments here. 0000
You need to complete the following steps for an experiment. Explain whether an acrylamide gel or an agarose gel is more appropriate to use for the following experiments. Purifying tRNA from total RNA Isolating a vector insert for cloning Analyzing PCR products