Biochemistry
9th Edition
ISBN: 9781319114671
Author: Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.
Publisher: W. H. Freeman
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- What is the formula used to calculate the number of DNA molecules which will be created for a given number of PCR cycles.arrow_forwardWhy is taq polymerase used in pcr reactions.arrow_forwardThe following figure shows the FBI-style analysis of the genomic DNA of 10 people (1-10), and also of hair found at a crime scence left by the murderer [***]. This analysis involves the PCR amplification of SSR loci, each from a different (nonhomologus) chromosome. The PCR primers are for each SSR locus are labeled with a unique fluorescent molecule. Some bands are thicker because relatively more of the corresponding PCR product was obtained. The figure has dots aligned on both sides to help you find the crucial bands; it will help to use a straight-edge as a guide. The numbers at right are the total number of copies of the SSR locus among the population of 11 samples. e. What is the probability that any random male in USA would share the same genotype as the murderer (the match probability)? Assume that all 11 DNA samples analyzed in the diagram are together representative of the USA population as a whole. Show what numbers you would multiply to do this calculation.arrow_forward
- How does RT-PCR differ from traditional PCR?arrow_forwardWhat is the nature of the primers used in RT-PCR tests? (i.e. are they DNA primers or RNA primers?)arrow_forwardThe ability to multiplex the PCR reactions used in STR analysis (many PCR amplifications occurringin the same tube at the same time) simplifies the DNA profiling technique a great deal. However,the analysis of the PCR products involves measuring only their size and their color, and this is allthe software needs to know in order to figure out which PCR products are from which locus. Howcan the analysis software tell all the various loci apart?arrow_forward
- Why is a thermostable form of DNA polymerase (e.g., Taqpolymerase) used in PCR? Is it necessary to use a thermostableform of DNA polymerase in the dideoxy method or in site-directedmutagenesis?arrow_forwardWhy would you look for ARGs in a farming context And why specifically in the waste manure produced at a farm? please prehrase and find the answer in the articlearrow_forward(b) The treatment given to the patient was 10 mg of menadione (formula on the right) every 6 hr with a dose of 1 g of ascorbate (Vitamin C) every 6 hr. The rationale for this treatment was that menadione (also called Vitamin K3) could accept electrons from reduced CoQ of the electron transport chain, shuttle them to reduce ascorbate, which, in turn, could reduce cytochrome c(Fe3*) to cytochrome c(Fe2*) that in turn becomes the substrate of Complex IV or cytochrome c oxidase. This artificial sys- tem would bypass the defective Complex III site in the electron transfer chain. To show the effect of this regimen with respect to the ADP phos- phorylative capacity of her skeletal muscle, corresponding 31P NMR spectra are shown on the right. „CH3 2-methyl-1,4-naphthoquinone (menadione)arrow_forward
- QUESTION 5: Should PCR primers be complementary to each other? Explain the reasoning for your answer.arrow_forwardExperiment 1: An RT-PCR was run on human cells growing in tissue culture under standard conditions, using the primers described above. A normal PCR was also run on the cells, using the same primers. They were run on an agarose gel shown on the left in the figure (gel 1), in the wells indicated by ‘RT-PCR’ and ‘PCR’. The arrow shows the direction of current in the gel. a) Observe the gel and describe the results for the RT-PCR and PCR (no explanation, just describe). b) Explain why the bands have travelled different distances on the gel.arrow_forwardIf a researcher attempted to do a PCR amplification of the slc24a5 gene in the gol1 mutatant line, would their attempts have been successful? Why or why not? No; PCR amplification will not be successful because the gene is deleted in the golb1 mutatant line. No; PCR amplification will not be successful because there is a point mutation in the coding region of the gene. Yes; this mutant line had a point mutation that would not have impacted PCR. Yes; although the gene switch was mutated, it did not impact the promotor sequence. O O O Oarrow_forward
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