Based on the BLASTp and Reciprocal hit analysis is mus musculus a true ortholog for the human fgfr3 gene?

Human Anatomy & Physiology (11th Edition)
11th Edition
ISBN:9780134580999
Author:Elaine N. Marieb, Katja N. Hoehn
Publisher:Elaine N. Marieb, Katja N. Hoehn
Chapter1: The Human Body: An Orientation
Section: Chapter Questions
Problem 1RQ: The correct sequence of levels forming the structural hierarchy is A. (a) organ, organ system,...
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Based on the BLASTp and Reciprocal hit analysis is mus musculus a true ortholog for the human fgfr3 gene?
First BLASTP
Mastp of M. Musculus with human FGFR3 (NP_075254.1) as the query.
TOP HIT: fibroblast growth factor receptor 3 isoform 5 (Mus musculur)
Sequence ID: NP_001345966.1
Query 172 VRFRCPAAGNPTPSISWLK-
VFC + PIWLK
a
DG YTC+ NG
Query 1
Sbjct
159
Query 61 VPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAILGSDVEFHCKVY
VPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTA+LGSDVEFHCKVY
VPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVY
277
Sbjct 219
229
KVSLESNASMSSNTPLVRIAR 330
+VSLESN+SM+SNTPLVRIAR
284
Query 121 SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYT
SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYT
SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYT
Query 278 YSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVL
L G
Sbjct 279
338
Sbjet 230 LVVAAVILCRLRSPPKKGL- -GSPTVHKVSRFPLKROVSLESNSSMNSNTPLVRIAR
390
LSSGEGP LANVSELELPADPKWELSR RLTLGKPLGEGCFGOVVMAEAIGIDKDR AKP
344
450
Query 331 LSSGEGPTLANVSELELPADPKWELSRARLTLGKPLGEGCFGOVVMAEAIGIDKDRAAKP
Query 181 CLAGNSIGFSHHSAWLVVL PAEEELMETDEAGSVYAGVLSYGVVFFLFILVVAAVILCRL 240
CLAGNSIGFSHHSAWLVVL PAEEEL+E DEAGSVYAG+LSYGV FFLFILVVAAV LCRL
Sbjet 285 LSSGEGPVLANVSELELPADPKWELSRTALTLGKPLGEGCFGQVVMAEAIGIDKDRTAKP
Sbjct 339 CLAGNSIGFSHHSAWLVVL PAEEELVEADEAGSVYAGILSYGVGFFLFILVVAAVTLCRL 398
Query 391 VTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTOGGPLYVLVEYAAKGN
VTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTOGGPLYVLVEYAAKGN
Query 241
RSPPKKGLGSPTVHKVSRFPLKROVSLESNSSMNSNTPLVRIARLSSGEGPVLANVSELE 300
Sbjct 345 VTVAVIMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTOGGPLYVLVEYAAKGN 404
RSPPKKGLGSPTVHK+SRFPLKROVSLESN+SM+SNTPLVRIARLSSGEGP LANVSELE
Sbjct 399 RSPPKKGLGSPTVHKISRFPLKROVSLESNASMSSNTPLVRIARLSSGEGPTLANVSELE 458
Query 451 LREFLRARRPPGLDYSFDTCKPPEEOLTFKDLVSCAYOVARGHEYLASOKCIHRDLAARN 510
LREFLRARRPPG+DYSFD C+ PEEQLT KDLVSCAYOVARGMEYLASOKCIHRDLAARN
Query 301 LPADPKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDRTAKPVTVAVKMLKDDATDKD 360
Sbjct 405 LREFLRARRPPGMDYSFDACRLPEEQLTCKDLVSCAYQVARGMEYLASQKCIHRDLAARN 464
LPADPKWELSR RLTLGKPLGEGCFGQVVMAEAIGIDKDR AKPVTVAVKMLKDDATDKD
Query 511 VLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFDRVYTHOSDVWSFGV 570
Sbjct 459 LPADPKWELSRARLTLGKPLGEGCFGQVVMAEAIGIDKDRAAKPVTVAVKMLKDDATDKD 518
VLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFORVYTHOSDVWSFGV
Sbjet 465 VLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFORVYTHOSDVWSFGV 524
Query 361 LSDLVSEMEMMKMIGKHKNIINLLGACTOGGPLYVLVEYAAKGNLREFLRARRPPGMDYS 420
Query 571 LLWEIFTLGGSPYPGIPVEELFKLLKEGHRMOKPANCTHDLYMIMRECWHAAPSORPTFK 630
LSDLVSEMEMMKMIGKHKNIINLLGACTOGGPLYVLVEYAAKGNLREFLRARRPPG+DYS
Sbjct 519 LSDLVSEMEMMKMIGKHKNIINLLGACTOGGPLYVLVEYAAKGNLREFLRARRPPGLDYS 578
Sujet 525 LLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPASCTHDLYMIMRECWHAVPSORPTFK 584 Query 421 FDACRLPEEQLTCKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGL 480
A
9
+G+
Sbjct 113 VEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTOKELEVLSLHNVT
Query 220
Sbjct 173 FEDAGEYTCLAGNSIGFSHHSAWLWL-AEEELMETDEAGSVYAGVLSYGVVFFLFI
PSDRGNYTCWVENKFGSIROTYTLDVLERSHRPILOAGLPANQT-AVLGSDVEFHCKV
L VL
▬
10
NGREFRGEHRIGGINLR 100WS-LVMESVV 219
++L+V
+G
172
G+P V +
Q Search
LLWEIFTLGGSPYPGIPVEELFKLLKEGHRMOKPA CTHDLYMIMRECWHA PSORPTFK
VL VF+
11
12
13
14
15
Blastp of humans with M. Musculus top hit (NP_001345966.1) as query.
TOP HIT: fibroblast growth factor receptor 3 isoform 1 precursor [Homo sapiens]
Sequence ID: NP_000133.1
16
MDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGKEFRGEHRIGGIKLRHQQWSLVMESV 60
MDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNG+EFRGEHRIGGIKLRHQQWSLVMESV
MDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHOQWSLVMESV 218
En r DECAIT VOI VECAVOVADCUEVI ACAVATUDDI AADAVI UTCOAUMUTADcri
120
278
180
12:27 PM
12/3/2023
Transcribed Image Text:First BLASTP Mastp of M. Musculus with human FGFR3 (NP_075254.1) as the query. TOP HIT: fibroblast growth factor receptor 3 isoform 5 (Mus musculur) Sequence ID: NP_001345966.1 Query 172 VRFRCPAAGNPTPSISWLK- VFC + PIWLK a DG YTC+ NG Query 1 Sbjct 159 Query 61 VPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAILGSDVEFHCKVY VPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTA+LGSDVEFHCKVY VPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVY 277 Sbjct 219 229 KVSLESNASMSSNTPLVRIAR 330 +VSLESN+SM+SNTPLVRIAR 284 Query 121 SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYT SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYT SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYT Query 278 YSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVL L G Sbjct 279 338 Sbjet 230 LVVAAVILCRLRSPPKKGL- -GSPTVHKVSRFPLKROVSLESNSSMNSNTPLVRIAR 390 LSSGEGP LANVSELELPADPKWELSR RLTLGKPLGEGCFGOVVMAEAIGIDKDR AKP 344 450 Query 331 LSSGEGPTLANVSELELPADPKWELSRARLTLGKPLGEGCFGOVVMAEAIGIDKDRAAKP Query 181 CLAGNSIGFSHHSAWLVVL PAEEELMETDEAGSVYAGVLSYGVVFFLFILVVAAVILCRL 240 CLAGNSIGFSHHSAWLVVL PAEEEL+E DEAGSVYAG+LSYGV FFLFILVVAAV LCRL Sbjet 285 LSSGEGPVLANVSELELPADPKWELSRTALTLGKPLGEGCFGQVVMAEAIGIDKDRTAKP Sbjct 339 CLAGNSIGFSHHSAWLVVL PAEEELVEADEAGSVYAGILSYGVGFFLFILVVAAVTLCRL 398 Query 391 VTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTOGGPLYVLVEYAAKGN VTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTOGGPLYVLVEYAAKGN Query 241 RSPPKKGLGSPTVHKVSRFPLKROVSLESNSSMNSNTPLVRIARLSSGEGPVLANVSELE 300 Sbjct 345 VTVAVIMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTOGGPLYVLVEYAAKGN 404 RSPPKKGLGSPTVHK+SRFPLKROVSLESN+SM+SNTPLVRIARLSSGEGP LANVSELE Sbjct 399 RSPPKKGLGSPTVHKISRFPLKROVSLESNASMSSNTPLVRIARLSSGEGPTLANVSELE 458 Query 451 LREFLRARRPPGLDYSFDTCKPPEEOLTFKDLVSCAYOVARGHEYLASOKCIHRDLAARN 510 LREFLRARRPPG+DYSFD C+ PEEQLT KDLVSCAYOVARGMEYLASOKCIHRDLAARN Query 301 LPADPKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDRTAKPVTVAVKMLKDDATDKD 360 Sbjct 405 LREFLRARRPPGMDYSFDACRLPEEQLTCKDLVSCAYQVARGMEYLASQKCIHRDLAARN 464 LPADPKWELSR RLTLGKPLGEGCFGQVVMAEAIGIDKDR AKPVTVAVKMLKDDATDKD Query 511 VLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFDRVYTHOSDVWSFGV 570 Sbjct 459 LPADPKWELSRARLTLGKPLGEGCFGQVVMAEAIGIDKDRAAKPVTVAVKMLKDDATDKD 518 VLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFORVYTHOSDVWSFGV Sbjet 465 VLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFORVYTHOSDVWSFGV 524 Query 361 LSDLVSEMEMMKMIGKHKNIINLLGACTOGGPLYVLVEYAAKGNLREFLRARRPPGMDYS 420 Query 571 LLWEIFTLGGSPYPGIPVEELFKLLKEGHRMOKPANCTHDLYMIMRECWHAAPSORPTFK 630 LSDLVSEMEMMKMIGKHKNIINLLGACTOGGPLYVLVEYAAKGNLREFLRARRPPG+DYS Sbjct 519 LSDLVSEMEMMKMIGKHKNIINLLGACTOGGPLYVLVEYAAKGNLREFLRARRPPGLDYS 578 Sujet 525 LLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPASCTHDLYMIMRECWHAVPSORPTFK 584 Query 421 FDACRLPEEQLTCKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGL 480 A 9 +G+ Sbjct 113 VEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTOKELEVLSLHNVT Query 220 Sbjct 173 FEDAGEYTCLAGNSIGFSHHSAWLWL-AEEELMETDEAGSVYAGVLSYGVVFFLFI PSDRGNYTCWVENKFGSIROTYTLDVLERSHRPILOAGLPANQT-AVLGSDVEFHCKV L VL ▬ 10 NGREFRGEHRIGGINLR 100WS-LVMESVV 219 ++L+V +G 172 G+P V + Q Search LLWEIFTLGGSPYPGIPVEELFKLLKEGHRMOKPA CTHDLYMIMRECWHA PSORPTFK VL VF+ 11 12 13 14 15 Blastp of humans with M. Musculus top hit (NP_001345966.1) as query. TOP HIT: fibroblast growth factor receptor 3 isoform 1 precursor [Homo sapiens] Sequence ID: NP_000133.1 16 MDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGKEFRGEHRIGGIKLRHQQWSLVMESV 60 MDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNG+EFRGEHRIGGIKLRHQQWSLVMESV MDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHOQWSLVMESV 218 En r DECAIT VOI VECAVOVADCUEVI ACAVATUDDI AADAVI UTCOAUMUTADcri 120 278 180 12:27 PM 12/3/2023
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