Organic Chemistry - Standalone book
10th Edition
ISBN: 9780073511214
Author: Francis A Carey Dr., Robert M. Giuliano
Publisher: McGraw-Hill Education
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Chapter 26, Problem 39P
Interpretation Introduction
Interpretation:
The sites of cleavage during the trypsin catalyzed and the chymotrypsin catalyzed hydrolysis of the given protein are to be identified.
Concept Introduction:
Hydrolysis of the peptide bonds with the help of enzymes is selective.
Trypsin is a digestive enzyme which catalyzes the hydrolysis of the peptide bonds that involve the carboxyl group of arginine or lysine residue.
Chymotrypsin catalyzes the hydrolysis of the peptide bonds which involve the carboxyl group of amino acids having an
There are three such amino acids – phenylalanine, tyrosine, and tryptophan.
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Chorismate mutase is an enzyme that promotes a pericyclic reaction by forcing the substrate to assume the conformation needed for the reaction. The product of the pericyclic reaction is prephenate that is subsequently converted into the amino acids phenylalanine and tyrosine. What kind of a pericyclic reaction does chorismate mutase catalyze?
Many peptides react further after synthesis
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In this example a cysteine cyclizes to form a thiazole
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O=
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Chapter 26 Solutions
Organic Chemistry - Standalone book
Ch. 26.1 - Prob. 1PCh. 26.2 - Prob. 2PCh. 26.2 - Prob. 3PCh. 26.3 - Prob. 4PCh. 26.3 - Prob. 5PCh. 26.4 - Prob. 6PCh. 26.4 - Prob. 7PCh. 26.4 - Prob. 8PCh. 26.5 - Prob. 9PCh. 26.6 - Prob. 10P
Ch. 26.6 - Prob. 11PCh. 26.6 - Prob. 12PCh. 26.7 - Prob. 13PCh. 26.7 - Prob. 14PCh. 26.7 - Prob. 15PCh. 26.7 - Prob. 16PCh. 26.7 - Prob. 17PCh. 26.9 - Prob. 18PCh. 26.10 - Digestion of the tetrapeptide of Problem 26.18...Ch. 26.12 - Prob. 20PCh. 26.12 - Prob. 21PCh. 26.15 - Prob. 22PCh. 26.15 - Prob. 23PCh. 26.16 - Prob. 24PCh. 26.17 - Prob. 25PCh. 26.18 - Prob. 26PCh. 26 - Prob. 27PCh. 26 - Prob. 28PCh. 26 - Prob. 29PCh. 26 - Prob. 30PCh. 26 - Prob. 31PCh. 26 - Prob. 32PCh. 26 - Prob. 33PCh. 26 - Prob. 34PCh. 26 - Prob. 35PCh. 26 - Prob. 36PCh. 26 - Prob. 37PCh. 26 - Prob. 38PCh. 26 - Prob. 39PCh. 26 - Prob. 40PCh. 26 - If you synthesized the tripeptide Leu-Phe-Ser from...Ch. 26 - Prob. 42PCh. 26 - Prob. 43PCh. 26 - Prob. 44PCh. 26 - Prob. 45DSPCh. 26 - Prob. 46DSPCh. 26 - Prob. 47DSPCh. 26 - Prob. 48DSPCh. 26 - Prob. 49DSPCh. 26 - Prob. 50DSP
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- In carbonic anhydrase II, Zn* acts as a Lewis acid coordinated in the enzyme active site to histidines in a tetrahedral geometry for peptide bond cleavage. * True Falsearrow_forward[Review Topics] (References) The isoelectric point, pl, of the protein lipase A is 4.9 , while that of nitrate reductase is 4.2 . What is the net charge of lipase A at pH 5.1 ? What is the net charge of nitrate reductase at pH 2.5 ? The isoelectric point of glycine is 5.97 ; arginine, 10.76. During paper electrophoresis at pH 7.1 , toward which electrode does glycine migrate? During paper electrophoresis at pH 7.5 , toward which electrode does arginine migrate?arrow_forwardThe following data were recorded from an experiment to measure the activity of a peptidase enzyme. A number of solutions of different concentrations of a dipeptide were prepared then the same small amount of the enzyme was added to each of them. The rate of cleavage of the peptide bond was measured and the initial rate of the reaction was recorded Peptide conc (mmol L-¹) 0.334 0.450 0.667 1.00 1.33 1.67 Initial rate 0.152 0.201 0.269 0.417 0.505 0.667 (mmol L¹ s¹) For the peptidase enzyme find the maximum velocity and the Michaelis constant.arrow_forward
- Researchers analysed a glycopeptide (a peptide carrying one or several oligosaccharide groups) and determined both the sequence of the peptide and the sequence of the sugar molecule. The latter was identified as a diholoside coupled to the peptide by an osidic bond. The systematic name of this sugar is: B-D-glucopyranosyl-(1→4)-ß-D-galactopyranose. : Represent the chemical formula of this diholoside in a way that all oses are Question 1 represented according to the Haworth convention. Apart from the furane and/or pyrane cycles all atoms of this molecule must be given.arrow_forwardShow the mechanism and explain how the Ala-Val-Ile peptide bond is formed.arrow_forwardAn enzyme catalyzes the hydrolysis of an ester with a certain activity, but this activity is lost in a 3 M urea solution. What is the most likely explanation for the loss of activity? (A) Urea binds to the active site of the enzyme competitively with the substrate. (B) Urea causes the cleavage of the peptide bonds in the enzyme. (C) Urea causes the enzyme to denature and lose its specific three-dimensional shape. (D) Urea reacts with disulfide bonds in the enzyme.arrow_forward
- Some proteases are cysteine proteases and threonine proteases as opposed to serine proteases. What properties of these amino acids residues allow them to be in a similar catalytic process? Cysteine: R=-CH2SH Threonine: R= -CH(CH3)OHarrow_forwardDetermine the amino acid sequence of a polypeptide from the following data:Acid-catalyzed hydrolysis gives Ala, Arg, His, 2 Lys, Leu, 2 Met, Pro, 2 Ser, Thr, and Val.Carboxypeptidase A releases Val.Edman’s reagent releases PTH-Leu.Trypsin-catalyzed hydrolysis gives three peptides and a single amino acid:1. Arg, Leu, Ser 3. Lys2. Met, Pro, Ser, Thr, Val 4. Ala, His, Lys, Metarrow_forwardhow the active site (specifically the "deep, hydrophobic pocket") accounts for the specificity of the peptide bonds that are cleaved by chymotrypsin. Below is a figure that shows the active site for two other serine proteases, trypsin and elastase. Based on the information provided, at what C-terminus would you expect elastase to selectively cleave? Choose the best option from those provided. Chymotrypsin ala arg asn asp Asp 189- Asp 189 Trypsin Val 190 Val 216 Val 216 Val 190 Elastasearrow_forward
- Deduce the sequence of a heptapeptide that contains the amino acids Ala, Arg, Glu, Gly, Leu, Phe, and Ser, from the following experimental data. Edman degradation cleaves Leu from the heptapeptide, and carboxypeptidase forms Glu and a hexapeptide. Treatment of the heptapeptide with chymotrypsin forms a hexapeptide and a single amino acid. Treatment of the heptapeptide with trypsin forms a pentapeptide and a dipeptide. Partial hydrolysis forms Glu, Leu, Phe, and the tripeptides Gly-Ala-Ser and Ala-Ser-Arg.arrow_forwardDeduce the sequence of a heptapeptide that contains the amino acids Ala, Arg, Glu, Gly, Leu, Phe, and Ser, from the following experimental data. Edman degradation cleaves Leu from the heptapeptide, and carboxypeptidase forms Glu and a hexapeptide. Treatment of the heptapeptide with chymotrypsin forms a hexapeptide and a single amino acid. Treatment of the heptapeptide with trypsin forms a pentapeptide and a dipeptide. Partial hydrolysis forms Glu, Leu, Phe, and the tripeptides Gly–Ala–Ser and Ala–Ser–Arg.arrow_forwardWhich one will make the largest contribution to hydrophobic interactions via LDFs within the active site of an enzyme?arrow_forward
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