Evolution
Evolution
4th Edition
ISBN: 9781605356051
Author: Douglas Futuyma, Mark Kirkpatrick
Publisher: SINAUER
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Chapter 16, Problem 6PDT
Summary Introduction

To determine: What a biologist should do if she finds that different methods of analyzing the same data provide different estimates of the relationship among certain taxa.

Introduction: The evolutionary relationship between different organisms and the history of different groups of organisms is depicted by an evolutionary tree. Several different analytical methods exist to depict this, thus giving different estimates of the relationship between different groups of organisms.

Summary Introduction

To determine: What a biologist should do if she finds that different methods of analyzing the same data give the same estimate of the relationship among certain taxa but the estimates differ depending on which of the two different genes has been sequenced.

Introduction: In phylogenetics, the relationship between different groups of organisms is studied. The evolutionary relationship between different organisms and the history of different groups of organisms is depicted by an evolutionary tree. Several different analytical methods exist to depict this, thus giving different estimates of the relationship between different groups of organisms.

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Since nucleotide sequences are more variable than amino acid sequences, you’ll use GAPDH nucleotide sequences to compare across the six taxa you’re analyzing. Suppose that you used BLAST to align all possible pairs of GAPDH sequences among lancelet, lamprey, bass, frog, turtle, and leopard. You would be able to construct the following table showing the percent similarity values across all six taxa.   Leopard Turtle Frog Bass Lamprey Lancelet Leopard 100% 83% 80% 81% 76% 74% Turtle – 100% 79% 79% 74% 72% Frog – – 100% 79% 74% 71% Bass – – – 100% 77% 74% Lamprey – – – – 100% 73% Lancelet – – – – – 100% Now you can use this data (similarly to how you used the data in the character table) to build a phylogenetic tree. The distance between species in a tree is directly related to the amount of similarity between their gene sequences. For instance, two species will be closer together if the amount of similarity is high, or far apart if the amount of similarity is low. Which…
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For the trichome selection experiment, the null hypothesis is that there will be no difference between the mean number of trichomes in the second generation compared to the parent generation. The following bar graph shows the data from the experiment, including error bars showing ± 2 standard deviations (a measure of variation for a group of data as a whole). Based on the data provided, do you reject or fail to reject the null hypothesis? Select the answer that most strongly supports your choice and correctly justifies the response.   Based on the data provided, do you reject or fail to reject the null hypothesis? Select the answer that most strongly supports your choice and correctly justifies the response. A. Reject the null hypothesis, as variation, shown by the error bars, is greater after selection. B. Reject the null hypothesis, as there is no overlap between the means as shown by the error bars. C. Reject the null hypothesis, as the error bars for the two groups show…
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