1. How many TSS sites were identified using this technique? 2. Look at the labels next to each of the annotated TSSs. What are the labels for the TSS sites?  3. What is the coordinate for TSS_tra_16584216?

Biology: The Unity and Diversity of Life (MindTap Course List)
14th Edition
ISBN:9781305073951
Author:Cecie Starr, Ralph Taggart, Christine Evers, Lisa Starr
Publisher:Cecie Starr, Ralph Taggart, Christine Evers, Lisa Starr
Chapter8: Dna Structure And Function
Section: Chapter Questions
Problem 4DAA: HersheyChase Experiments The graph shown in FIGURE 8.5 is reproduced from an original 1952...
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1. How many TSS sites were identified using this technique?


2. Look at the labels next to each of the annotated TSSs. What are the labels for the TSS sites? 

3. What is the coordinate for TSS_tra_16584216?

UcsC Genome Browser on D. melanogaster July 2014 (Gene) Assembly (dm3gene)
move co or
2oom out DOC
20om in 1
contigt9,700-9.900 201 bp
Scale
100 bases
dnagene
cantigt: laziol azol a730| 87lasol azeola770l azeolasolaacol anol secol seol alsesol sasol serol s.0ocl sosol
Feese Genes
Transoriptien San Shes idented by modENCODE
TSS
esn
TSS _ so
modENCODE RNA-Sefron D melanogaster whoe Adut Females
Adut Females
Click on a feature for details. Click or drag in the base position track to zoom in. Click side bars for track
options. Drag side bars or labels up or down to reorder tracks. Drag tracks left or right to new position.
t utd t O
Use drop-down controis below and press refresh to alter tracks displayed.
Tracks with lots of tems will automatically be displayed in more compact modes
move start
move end
Mapping and Sequencing Tracks
Restr Erymes
Base Position
GC Percent
Short Match
Genes and Gene Prediction Tracks
FyBase Genes
Genscan Genes
NSCAN Genes
D. mel cONAS
TSS Annotations
tre
Isoform
RNA Seg Tracks
RNA-Seg
Coverage
Exon Junctions
Transcribed Image Text:UcsC Genome Browser on D. melanogaster July 2014 (Gene) Assembly (dm3gene) move co or 2oom out DOC 20om in 1 contigt9,700-9.900 201 bp Scale 100 bases dnagene cantigt: laziol azol a730| 87lasol azeola770l azeolasolaacol anol secol seol alsesol sasol serol s.0ocl sosol Feese Genes Transoriptien San Shes idented by modENCODE TSS esn TSS _ so modENCODE RNA-Sefron D melanogaster whoe Adut Females Adut Females Click on a feature for details. Click or drag in the base position track to zoom in. Click side bars for track options. Drag side bars or labels up or down to reorder tracks. Drag tracks left or right to new position. t utd t O Use drop-down controis below and press refresh to alter tracks displayed. Tracks with lots of tems will automatically be displayed in more compact modes move start move end Mapping and Sequencing Tracks Restr Erymes Base Position GC Percent Short Match Genes and Gene Prediction Tracks FyBase Genes Genscan Genes NSCAN Genes D. mel cONAS TSS Annotations tre Isoform RNA Seg Tracks RNA-Seg Coverage Exon Junctions
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